Portfolio

My Portfolio

Welcome to my portfolio. Here is a list of the projects I have worked on:

Exploring Drug Discovery Strategies for Metallo ß-lactamase (MBL) using Diffusion Models for Molecular Generation

Image for MSc Bioinformatics Research Project (Ongoing)

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An interactive tool built using Python for exploring protein sequences within the NCBI protein database. This project was developed as part of the Bioinformatics Programming and Systems Management (BPSM) In-Course Assessment 2 and obtained 90%.

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A bioinformatics tool built entirely in Bash, for running fastqc, sequence alignment and bioinformatics analysis of a dynamic genomic dataset. This project was developed as part of the Bioinformatics Programming and Systems Management (BPSM) In-Course Assessment 1 and obtained 85%.

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An interactive drug discovery website employing AI for generating novel drug molecules. This project is currently under construction.

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A website for ChemPALS, a peer-assisted learning scheme that I have led and developed for chemistry students at the University of Edinburgh. The development of this website is ongoing and more updates will be on it very soon!

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A Python programme for the Smith Waterman algorithm, developed as part of the Bioinformatics Algorithm In-Course Assessment. This is kept private until marks are released.

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A research project to model the impact of antibiotics on ribosomal dynamics in Escherichia coli, as part of the Practical Systems Biology (PSB) course. This is kept private until marks are released.

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A self-led research project to compare the performance of different docking software (AutoDock Vina, rDock and Flare) for use in the drug design against the main protease of SARS-CoV-2. This is kept private until all relevant materials are prepared.

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A year-long research project to optimise the synthetic and recovery processes for two precious APIs. The combined effect of these projects exceeds 230,000 litres of chlorinated solvents in savings for the company. This project was conducted as part of my placement year at Veranova (previously Johnson Matthey Health, also known as MacFarlan Smith), a pharmaceutical company specialising in Controlled Drug (CD) manufacturing in the UK.

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